GSM4205373: RNAseq_N2_larvae_3h; Caenorhabditis elegans; RNA-Seq - SRA

SRX7276526: GSM4205373: RNAseq_N2_larvae_3h; Caenorhabditis elegans; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2500) run: 33.2M spots, 1.7G bases, 570Mb downloads

Submitted by: NCBI (GEO)

Study: mRNA sequencing time course of C. elegans samples at time point 1 hours until time point 24 hours at 25 degrees [N2 control]

PRJNA593746 • SRP234874 • All experiments • All runs

show Abstracthide Abstract

We find gene expression oscillations which arise after a time lag of around 5 hours. Overall design: Examination of gene expression profiles over time (1-24 hours after plating L1 arrested C. elegans larvae) using high throughput mRNA sequencing.

Sample: RNAseq_N2_larvae_3h

SAMN13483956 • SRS5770539 • All experiments • All runs

Organism: Caenorhabditis elegans

Library:

Instrument: Illumina HiSeq 2500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: SINGLE

Construction protocol: RNA was extracted using Trizol and conventional Phenol / Chlorophorm extraction. Illumina TruSeq mRNA-Seq Sample Prep Kit (Stranded - high input), followed by the Hiseq50 Cycle Single-end reads on HiSeq2500 protocol

Experiment attributes:

GEO Accession: GSM4205373

Links:

NCBI link: NCBI Entrez (gds)

Runs: 1 run, 33.2M spots, 1.7G bases, 570Mb

Run	# of Spots	# of Bases	Size	Published
SRR10596687	33,246,101	1.7G	570Mb	2020-07-27

ID:: 9551673

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