GSM4094625: yccT mutant_untreated_rep2; Salmonella enterica subsp. en... - SRA

SRX6895307: GSM4094625: yccT mutant_untreated_rep2; Salmonella enterica subsp. enterica serovar Enteritidis; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2500) run: 12.1M spots, 617.6M bases, 282Mb downloads

Submitted by: NCBI (GEO)

Study: Characterization of novel STY1099 protein involved in the peroxide stress response of Salmonella Enteritidis

PRJNA573907 • SRP223088 • All experiments • All runs

show Abstracthide Abstract

We report our results of RNA-seq analysis on the wild type Salmonella Enteritidis and its yccT (i.e., yccT encodes STY1099 protein) mutant with and without H2O2 treatment Overall design: RNA was isolated from cultures of the wild type Salmonella Enteritidis and S. Enteritidis yccT mutant exposed to H2O2 and without exposure to H2O2. Libraries were created using standard Illumina reagents and analyzed using a HiSeq 2500 Illumina.

Sample: yccT mutant_untreated_rep2

SAMN12830360 • SRS5428152 • All experiments • All runs

Organism: Salmonella enterica subsp. enterica serovar Enteritidis

Library:

Instrument: Illumina HiSeq 2500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: SINGLE

Construction protocol: RNA was extracted using the RNAeasy Kit from Qiagen. All bacterial samples were re-suspended in RNAprotect bacterial agent (Qiagen, Valencia, CA, USA) and stored at -20°C until RNA extraction

Experiment attributes:

GEO Accession: GSM4094625

Links:

NCBI link: NCBI Entrez (gds)

Runs: 1 run, 12.1M spots, 617.6M bases, 282Mb

Run	# of Spots	# of Bases	Size	Published
SRR10173803	12,109,044	617.6M	282Mb	2019-09-26

ID:: 9072651

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity