GSM4094624: yccT mutant_untreated_rep1; Salmonella enterica subsp. en... - SRA

SRX6895306: GSM4094624: yccT mutant_untreated_rep1; Salmonella enterica subsp. enterica serovar Enteritidis; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2500) run: 12M spots, 610.5M bases, 282Mb downloads

Submitted by: NCBI (GEO)

Study: Characterization of novel STY1099 protein involved in the peroxide stress response of Salmonella Enteritidis

PRJNA573907 • SRP223088 • All experiments • All runs

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We report our results of RNA-seq analysis on the wild type Salmonella Enteritidis and its yccT (i.e., yccT encodes STY1099 protein) mutant with and without H2O2 treatment Overall design: RNA was isolated from cultures of the wild type Salmonella Enteritidis and S. Enteritidis yccT mutant exposed to H2O2 and without exposure to H2O2. Libraries were created using standard Illumina reagents and analyzed using a HiSeq 2500 Illumina.

Sample: yccT mutant_untreated_rep1

SAMN12830361 • SRS5428151 • All experiments • All runs

Organism: Salmonella enterica subsp. enterica serovar Enteritidis

Library:

Instrument: Illumina HiSeq 2500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: SINGLE

Construction protocol: RNA was extracted using the RNAeasy Kit from Qiagen. All bacterial samples were re-suspended in RNAprotect bacterial agent (Qiagen, Valencia, CA, USA) and stored at -20°C until RNA extraction

Experiment attributes:

GEO Accession: GSM4094624

Links:

NCBI link: NCBI Entrez (gds)

Runs: 1 run, 12M spots, 610.5M bases, 282Mb

Run	# of Spots	# of Bases	Size	Published
SRR10173802	11,969,940	610.5M	282Mb	2019-09-26

ID:: 9072650

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