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SRX681784: GSM1479928: DSP1 Yak Rep1; Drosophila yakuba; ChIP-Seq
1 ILLUMINA (Illumina Genome Analyzer IIx) run: 8.7M spots, 311.5M bases, 304.6Mb downloads

Submitted by: Gene Expression Omnibus (GEO)
Study: Cooperativity, specificity and evolutionary stability of Polycomb targeting in Drosophila
show Abstracthide Abstract
We report the evolutionary behaviour of Polycomb group proteins, their recruitment factors and their underlying sequences by performing ChIP-seq analysis in 4-5 different Drosophila species. We demonstrate an extremely high conservation of Polycomb repressive domains across Drosophila species We validate few cases of PRE divergence that shows that cis-driven PRE evolution is a rare event. We further show that PHO recruitment to Polycomb domains is evolutionarily robust to motif changes and that PRC1 stabilizes binding of its key recruiter Overall design: ChIP-seq analysis of histone marks and chromatin associated factors across 4-5 Drosophila species
Sample: DSP1 Yak Rep1
SAMN02991148 • SRS685370 • All experiments • All runs
Library:
Instrument: Illumina Genome Analyzer IIx
Strategy: ChIP-Seq
Source: GENOMIC
Selection: ChIP
Layout: SINGLE
Construction protocol: Chromatin prepared from Drosophila embryos was immunoprecipitated with specific antibodies and precipitated DNA was isolated (see mat and methods for details) Libraries were prepared according to Illumina's instructions
Experiment attributes:
GEO Accession: GSM1479928
Links:
External link:
Runs: 1 run, 8.7M spots, 311.5M bases, 304.6Mb
Run# of Spots# of BasesSizePublished
SRR15522538,653,936311.5M304.6Mb2015-07-22

ID:
954114

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