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SRX6444513: GSM3941456: G13_F; Danio rerio; Bisulfite-Seq
1 ILLUMINA (Illumina HiSeq 2500) run: 80,039 spots, 40.2M bases, 12.6Mb downloads

Submitted by: NCBI (GEO)
Study: Sexual dimorphic methylation patterns in IL1b and Casp9 in the zebrafish gonads
show Abstracthide Abstract
Sexual dimorphic methylation patterns in IL1b and Casp9 in the zebrafish gonads Overall design: Ovaries and testes
Sample: G13_F
SAMN12276195 • SRS5098451 • All experiments • All runs
Organism: Danio rerio
Library:
Instrument: Illumina HiSeq 2500
Strategy: Bisulfite-Seq
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Gonads were extracted, flash frozen in nitrogen liquid. DNA was extracted following the Phenol-Chlorofrom DNA extraction. Bisulfite conversion was carried out using D5020, Zymo Research from 1000 ng of genomic DNA in each sample. Illumina Miseq 2500 wasused for sequencing the library. Library was constructed following the Illumina's protocol: “16S metagenomic library preparation” using Nextera XT Index Kit V2 set A, FC-131–2001 kit.
Experiment attributes:
GEO Accession: GSM3941456
Links:
Runs: 1 run, 80,039 spots, 40.2M bases, 12.6Mb
Run# of Spots# of BasesSizePublished
SRR968506980,03940.2M12.6Mb2021-07-01

ID:
8540456

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