GSM3814179: Sample 10; Capsicum annuum; Solanum lycopersicum; RNA-Seq - SRA

SRX5889032: GSM3814179: Sample 10; Capsicum annuum; Solanum lycopersicum; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2000) run: 27.7M spots, 2.8G bases, 1.8Gb downloads

Submitted by: NCBI (GEO)

Study: Graft junction transcriptome between tomato and pepper over time

PRJNA544493 • SRP199341 • All experiments • All runs

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We report transcripts from tomato:tomato and pepper:pepper self-grafts, and tomato:pepper and pepper:tomato hetergrafts over 4 time points: 24 hours after grafting, 3 days after grafting, 5 day after grafting, and 2 weeks after grafting Examination of 4 graft combinations over 4 time points Overall design: Margaret, H, Frank

Sample: Sample 10

SAMN11841182 • SRS4811180 • All experiments • All runs

Organism: Capsicum annuum

Library:

Instrument: Illumina HiSeq 2000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: SINGLE

Construction protocol: Trizol total RNA extraction mRNA was extracted following the NEBNext Poly(A) mRNA Magnetic Isolation Module protocol and libraries were prepared using the NEBNext mRNA Library Prep set for Illumina (New England Biolabs)

Experiment attributes:

GEO Accession: GSM3814179

Links:

NCBI link: NCBI Entrez (gds)

Runs: 1 run, 27.7M spots, 2.8G bases, 1.8Gb

Run	# of Spots	# of Bases	Size	Published
SRR9114825	27,739,225	2.8G	1.8Gb	2021-08-06

ID:: 7910824

SRA

Sequence Read Archive

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