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SRX5465785: GSM3640171: Left-atrium-PCM-1-adult-sample2; Homo sapiens; RNA-Seq
1 ILLUMINA (Illumina HiSeq 4000) run: 39.2M spots, 2G bases, 723.6Mb downloads

Submitted by: NCBI (GEO)
Study: Identification of Atrial Fibrillation associated genes and functional non-coding variants
show Abstracthide Abstract
Expression analysis of whole tissue and cardiomyocytes of fetal and adult atrial free wall Overall design: RNA-seq on human atrial tissue
Sample: Left-atrium-PCM-1-adult-sample2
SAMN11055557 • SRS4439578 • All experiments • All runs
Organism: Homo sapiens
Library:
Instrument: Illumina HiSeq 4000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Construction protocol: Whole tissue: Total RNA was isolated from the atrial tissue using Trizol according to the manufacturer's protocol (Sigma Aldrich), DNaseI treated and further purified using Nucleospin RNeasy MinElute Kit (Qiagen). PCM-1 samples: nuclei were extracted from snapfrozen samples, and stained with PCM-1 rabbit polyclonal antibody (Sigma) for FACS of specifically cardiomyocyte nuclei. Adult tissue: NuGEN's Ovation RNA-seq V2 kit. Fetal: Truseq Stranded Total RNA Library Preparation Kit (Illumina, Part# 15031048 Rev. E)
Experiment attributes:
GEO Accession: GSM3640171
Links:
Runs: 1 run, 39.2M spots, 2G bases, 723.6Mb
Run# of Spots# of BasesSizePublished
SRR866984739,173,8852G723.6Mb2019-10-29

ID:
7384422

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