GSM3537996: Varshadhan Biological Rep 1 (Control); Oryza sativa; RNA-... - SRA

SRX5202540: GSM3537996: Varshadhan Biological Rep 1 (Control); Oryza sativa; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2500) run: 21.6M spots, 5.4G bases, 1.7Gb downloads

Submitted by: NCBI (GEO)

Study: Preformed aerenchyma determines the differential tolerance response under partial submergence imposed by fresh and saline water flooding in rice

PRJNA512854 • SRP175167 • All experiments • All runs

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In this project we are investigating the differential mechanism of tolerance in rice under combined stresses of salinity and partial submergence as encountered during saline water flooding by looking into expression profile of DEGs and uniquely expressed genes. Overall design: 12 Rice plants were grown under fresh and saline water flooding conditions.

Sample: Varshadhan Biological Rep 1 (Control)

SAMN10689654 • SRS4207691 • All experiments • All runs

Organism: Oryza sativa

Library:

Instrument: Illumina HiSeq 2500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: PAIRED

Construction protocol: Using the standard Trizol Method. RNA libraries were prepared for sequencing using standard Illumina protocols.

Experiment attributes:

GEO Accession: GSM3537996

Links:

NCBI link: NCBI Entrez (gds)

Runs: 1 run, 21.6M spots, 5.4G bases, 1.7Gb

Run	# of Spots	# of Bases	Size	Published
SRR8392830	21,633,517	5.4G	1.7Gb	2021-06-30

ID:: 7038239

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