Illumina RNA sequencing of transcriptome paired-end library 'SM-3TVML... - SRA

SRX499151: Illumina RNA sequencing of transcriptome paired-end library 'SM-3TVML' containing sample '76_Day_0_HTKL_2'
4 ILLUMINA (Illumina HiSeq 2000) runs: 5.7M spots, 769.8M bases, 494.5Mb downloads

UUID: 46e122bb-4662-4b22-b69e-c1f7575c6a24

Design: Illumina sequencing of Mycobacterium tuberculosis via random selection

Submitted by: Broad Institute (BI)

Study: Bacterial/Fungal Persistence Gene Identification Multi-Isolate Project

PRJNA38649 • SRP001124 • All experiments • All runs

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Persistence Comparative

Sample: Generic sample from Mycobacterium tuberculosis

SAMN02594458 • SRS580716 • All experiments • All runs

Organism: Mycobacterium tuberculosis

Library:

Name: SM-3TVML

Instrument: Illumina HiSeq 2000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward69 reverse

Experiment attributes: (show all 10 attributes...) (hide...)

analysis_type: AssemblyWithoutReference

gssr_id: 472585.0

library_type: cDNAShotgunReadTwoSense

lsid: BROAD:SEQUENCING_SAMPLE:472585.0

material_type: New Tech Library

product_order: PDO-2973

product_part_number: P-SEQ-0003

project: G52210

research_project: RP-314

work_request: 40075

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-29 10:32:32.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 4 runs, 5.7M spots, 769.8M bases, 494.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR1202492	1,356,219	184.4M	118.4Mb	2014-03-24
SRR1202532	1,364,955	185.6M	118.9Mb	2014-03-24
SRR1202606	1,424,247	193.7M	124.9Mb	2014-03-24
SRR1208262	1,515,065	206M	132.3Mb	2014-03-30

ID:: 689248

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