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SRX4910586: GSM3439188: VRE treated [18]; Enterococcus faecium; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2500) run: 11.3M spots, 566.5M bases, 232.6Mb downloads

Submitted by: NCBI (GEO)
Study: RNASeq analysis of untreated versus treated
show Abstracthide Abstract
We report differential regulated genes in three pathogenic bacterial strains after treatment with a new antimicrobial. Overall design: Bacteria were grown in triplicates to mid-log phase in the presence or anbsence of PBT2+zinc and RNA was isolated for RNASeq analysis.
Sample: VRE treated [18]
SAMN10266251 • SRS3956312 • All experiments • All runs
Library:
Instrument: Illumina HiSeq 2500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Construction protocol: RNA was isolated using the FastRNA® Pro Blue Kit (MP Biomedicals) and the SV Total RNA Isolation System (Promega) RNASeq analysis was performed at the Australian Genome Research Facility. The library was prepared using a Ribo-zero stranded protocol. Libraries were sequenced with a HiSeq 2500 ultra-high-throughput sequencing system (Illumina) to produce 100-base-paired end reads.
Experiment attributes:
GEO Accession: GSM3439188
Links:
Runs: 1 run, 11.3M spots, 566.5M bases, 232.6Mb
Run# of Spots# of BasesSizePublished
SRR808353311,330,916566.5M232.6Mb2018-10-23

ID:
6611946

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