U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX4167857: GSM3168325: L2N1: Spinal cord; Rattus norvegicus; RNA-Seq
1 ILLUMINA (Illumina HiSeq 1500) run: 1.8M spots, 63.9M bases, 81.9Mb downloads

Submitted by: NCBI (GEO)
Study: Genome wide analysis of lower spinal cords with training after spinal cord hemisection injury
show Abstracthide Abstract
The goal of this study is to elucidate the influence of treadmill training on transcriptome of the lower lumbar spinal cord after thoracic spinal cord hemisection. mRNA profiles of spinal cords at 23 days-post injury with/without treadmill training were generated. The expression levels of 650 genes in the trained animal were increased ( > 2-fold) compared to untrained animals. Our study represents the detailed analysis of transcriptomes of spinal cord distal to the hemisected lesion after treadmill training, with biologic replicates, generated by RNA-seq technology. Overall design: The effect of training after spinal cord injury (T9) on the transcriptome of intact lower spinal cord was investigated.
Sample: L2N1: Spinal cord
SAMN09288694 • SRS3361208 • All experiments • All runs
Library:
Instrument: Illumina HiSeq 1500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Construction protocol: Spinal cords were removed, flash frozen in liquid nitrogen, and RNA was harvested. Library were constructed in accordance with the CEL-Seq2 protocol and prepared on the Illumina HiSeq1500 platform.
Experiment attributes:
GEO Accession: GSM3168325
Links:
Runs: 1 run, 1.8M spots, 63.9M bases, 81.9Mb
Run# of Spots# of BasesSizePublished
SRR72637211,773,71963.9M81.9Mb2024-05-21

ID:
5654538

Supplemental Content

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...