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SRX4119633: GSM3151855: Jej_4_L; Homo sapiens; RNA-Seq
1 ILLUMINA (Illumina HiSeq 4000) run: 6.1M spots, 304.8M bases, 104.6Mb downloads

Submitted by: NCBI (GEO)
Study: Human enteroendocrine cell transcriptomic profiling
show Abstracthide Abstract
We purified two populations of human jejunal enteroendocrine cells (GLP1+ and GLP1-) by FACS and identified transcripts enriched in endocrine cell lineages. Overall design: Comparative transcriptomic study of 3x cell populations by bulk RNAseq, with 11 biological replicates
Sample: Jej_4_L
SAMN09245809 • SRS3334447 • All experiments • All runs
Organism: Homo sapiens
Library:
Instrument: Illumina HiSeq 4000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Construction protocol: Human jejunal mucosal samples were dissociated to single cells, fixed in paraformaldehyde (4%), permeabilised with Saponin, Antibody labelled against GLP-1, CHGA and SCG2 and FACS sorted into 3x populations (GLP1-/CHGA+/SCG2+ [Single positive]; GLP1+/CHGA+/SCG2+ [Double positive]; triple negative [Neg]). RNA was extracted using the Ambion Recoverall total Nucelic Acid isolation kit following the MARIS protocol and concentrated using a Qiagen RNeasy Minelute cleanup kit. The library was constructed with 4ng of input RNA using the Clontech Smarter Stranded total RNA-seq - Pico Input mammalian kit v1
Experiment attributes:
GEO Accession: GSM3151855
Links:
Runs: 1 run, 6.1M spots, 304.8M bases, 104.6Mb
Run# of Spots# of BasesSizePublished
SRR72124606,095,267304.8M104.6Mb2019-01-01

ID:
5605194

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