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SRX3314158: GSM2828659: Vir_rep3; Drosophila melanogaster; RNA-Seq
1 ILLUMINA (NextSeq 500) run: 20.5M spots, 1.7G bases, 578.7Mb downloads

Submitted by: NCBI (GEO)
Study: RNA-Sequencing of Control KD and KD for Ime4-dMettl14, Fl(2)d, Vir, Nito, CG7358 in S2R+ cells
show Abstracthide Abstract
N6-methyladenosine (m6A) is an abundant RNA modification in eukaryotes, playing crucial roles in multiple biological processes. m6A is catalyzed by the activity of Mettl3, which depends on additional proteins whose precise functions remain poorly understood. Here we identified Flacc/Zc3h13 as a novel interactor of m6A methyltransferase complex components in Drosophila and mouse. Like other components, Flacc controls m6A levels and is involved in sex determination in Drosophila. We demonstrate that Flacc promotes the recruitment of the methyltransferase to mRNA by bridging Fl(2)d to the mRNA binding factor Spenito. Altogether, our work advances our molecular understanding of conservation and regulation of the m6A machinery. Overall design: Cells were treated with corresponding double stranded RNA three times during 6 days
Sample: Vir_rep3
SAMN07823317 • SRS2620028 • All experiments • All runs
Library:
Instrument: NextSeq 500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Construction protocol: Cells were pelleted and RNA was isolated with Trizol using standart protocol Librariesfor sequencing were prepared according to the NEBNext® Ultra™ Directional RNA Library Prep Kit protocol.
Experiment attributes:
GEO Accession: GSM2828659
Links:
Runs: 1 run, 20.5M spots, 1.7G bases, 578.7Mb
Run# of Spots# of BasesSizePublished
SRR620481120,461,2801.7G578.7Mb2018-12-26

ID:
4642094

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