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SRX3282176: GSM2811249: hESC line H9 cells after 8 hours of BMP4 treatment, biological replicate 2; Homo sapiens; RNA-Seq
4 ILLUMINA (NextSeq 500) runs: 39.2M spots, 2.9G bases, 1.1Gb downloads

Submitted by: NCBI (GEO)
Study: Time series total RNA sequencing of a differentiation of human embryonic stem cells towards trophoblast lineage
show Abstracthide Abstract
Human embryonic stem cells (hESC) can be differentiated towards progeny resembling trophoblast upon exposure to BMP4. Here we analysed transcriptional changes in cells undergoing commitment to trophoblast at 6 time points using total RNA sequencing and identified early and late regulators of trophoblast fate. Overall design: hESC cell line H9 was differentiated towards trophoblast lineage using treatment with BMP4. Cells were collected at time points 0 hours (undifferentiated cells), 8 hours, 16 hours, 24 hours, 48 hours and 72 hours and subjected to total RNA sequencing using Illumina platform.
Sample: hESC line H9 cells after 8 hours of BMP4 treatment, biological replicate 2
SAMN07782537 • SRS2592660 • All experiments • All runs
Organism: Homo sapiens
Library:
Instrument: NextSeq 500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Construction protocol: RNA was extracted using Qiagen RNeasy Mini kit according to manufacturer's instructions Total RNA libraries were prepared from 1 µg of total RNA using Illumina TruSeq Stranded Total RNA LT kit according to manufacturer's instructions.
Experiment attributes:
GEO Accession: GSM2811249
Links:
Runs: 4 runs, 39.2M spots, 2.9G bases, 1.1Gb
Run# of Spots# of BasesSizePublished
SRR61713579,906,203738.3M275.2Mb2017-10-16
SRR61713589,767,838728M270.1Mb2017-10-16
SRR61713599,919,724739.3M272.6Mb2017-10-16
SRR61713609,634,223718.1M265.8Mb2017-10-16

ID:
4604576

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