U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX24942256: GSM8332522: jmj4_25_2; Solanum lycopersicum; RNA-Seq
1 ILLUMINA (Illumina NovaSeq 6000) run: 21.7M spots, 6.5G bases, 2.1Gb downloads

External Id: GSM8332522_r1
Submitted by: Horticulture, Zhejiang university
Study: Histone demethylase JMJ4 interacts with transcription factor BLH3 to modulate jasmonate biosynthesis in tomato response to cold stress [RNA-seq]
PRJNA1124577 • SRP514247 • All experiments • All runs
show Abstracthide Abstract
To investigate the difference of gene expression regulated by JMJ4, we performed RNA-seq assay of jmj4 mutant and wild type plants under control and cold treatment conditions. Overall design: For RNA-seq, jmj4 mutant and wild type plants were both subjected to 25 degree and 4 degree treatment for 12h, then leaf samples were collected for high-throughput sequencing.
Sample: jmj4_25_2
SAMN41860327 • SRS21646346 • All experiments • All runs
Organism: Solanum lycopersicum
Library:
Name: GSM8332522
Instrument: Illumina NovaSeq 6000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: Total RNA extraction was conducted as manufacturer's instruction (Accurate Biology AG21019, Changsha, China). The RNA sequencing library was constructed by RNA library Prep Kit for Illumina (NEB E7770, Ipswich MA, USA).
Runs: 1 run, 21.7M spots, 6.5G bases, 2.1Gb
Run# of Spots# of BasesSizePublished
SRR2942939521,663,9316.5G2.1Gb2024-08-27

ID:
33278499

Supplemental Content

Related information

Search details

See more...

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...