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SRX2435219: GSM2432115: GC22 WT_Female_E2_1; Danio rerio; RNA-Seq
1 ILLUMINA (NextSeq 500) run: 20.1M spots, 1.5G bases, 607.8Mb downloads

Submitted by: NCBI (GEO)
Study: Estrogen sensing by GPER1 activates PI3K/mTOR to promote gender dimorphism in liver growth and cancer
show Abstracthide Abstract
Liver cancer is a common cause of cancer death, with a male-predominant incidence due, in part, to increased estrogen levels in cirrhotic patients. It is unknown, however, how estrogen is sensed to influence this process. Here, we show that estrogen activates the G protein-coupled estrogen receptor 1 (GPER1), expressed in hepatocytes, to enhancing hepatocyte size, cell cycle progression and cell proliferation, thereby increasing liver growth in zebrafish larvae and adults. GPER1 stimulation activates PI3K/mTOR signaling, and mTOR is essential for both normal and regenerative organ growth. Genetic loss of GPER1 diminishes and estrogen exposure accelerates chemical carcinogenesis, specifically in males. Chemical inhibition of GPER1 significantly reduces cancer incidence and progression in a gender-specific fashion. Our studies identify GPER1 as a hepatic estrogen sensor that mediates gender dimorphic growth, mTOR activation, and can serve as a therapeutic target for liver cancer treatment. Overall design: RNA-Seq analysis of control DMSO-treated livers and ß-Estradiol exposed livers were examined.
Sample: GC22 WT_Female_E2_1
SAMN06163322 • SRS1870217 • All experiments • All runs
Organism: Danio rerio
Library:
Instrument: NextSeq 500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Construction protocol: Adult zebrafish livers were surgically isolated and RNA was extracted in Trizol (Life Technologies), isopropanol precipitated and ethanol washed. RNA was DNase treated using TURBO DNA-free kit (Life Technologies) and RNA quality and quantity were determined using Qubit (Thermo Fisher) and bioanalyzer (Agilent). For library construction, NEBNext Directional RNA Library Prep Kit for Illumina (#E7420L) was used according to the company's protocol
Experiment attributes:
GEO Accession: GSM2432115
Links:
Runs: 1 run, 20.1M spots, 1.5G bases, 607.8Mb
Run# of Spots# of BasesSizePublished
SRR511994420,065,8361.5G607.8Mb2019-05-29

ID:
3534485

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