U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX23986058: GSM8152689: C5brain, Control; Rattus norvegicus; RNA-Seq
1 ILLUMINA (HiSeq X Ten) run: 22.5M spots, 6.8G bases, 2Gb downloads

External Id: GSM8152689_r1
Submitted by: Department of Cardiology, First Affiliated Hospital of Harbin Medical University
Study: Role of hypothalamic microglial activation on ventricular arrhythmias in stress cardiomyopathy
show Abstracthide Abstract
Background: Current stress cardiomyopathy (SCM) has a high incidence in older adults, and the theories revolve mostly around "catecholamine myocardial toxicity" and "sympathetic hyperactivation". However, the role of the central nervous system (CNS) in the pathogenesis of stress cardiomyopathy remains unknown. Methods: We investigated the role of microglia activation in the paraventricular hypothalamic nucleus (PVN) in the development of SCM. To create a SCM model, male Sprague-Dawley (SD) rats were immobilized for 6 hours every day for a week. Electrocardiogram, cardiac electrophysiology, and echocardiography were measured to verify the changes in cardiac structure and function in rats with stress cardiomyopathy. RNA sequencing was measured to explore the changes in the hypothalamus of stress cardiomyopathy. In addition, brain and heart tissues were extracted to detect microglial activation and sympathetic activity. Results: (1) Immobilization stress successfully induced SCM in SD rats. (2) Microglia were significantly activated in the hypothalamus, as evidenced by cytosol thickened and an increased in the number of branches and specifically enriched at PVN. (3) In SCM, microglia in the PVN increased central and peripheral cardiac sympathetic activity by increasing the expression of neuroinflammatory factors. (4) It is possible that inhibiting microglia activation could suppress central and heart sympathetic activity and increase the cardiac electrical stability in SCM rats. Conclusions: Immobilization stress induced SCM in SD rats can activate hypothalamic microglia, and the activated microglia are specifically enriched at PVN, which can increase the central and peripheral sympathetic nerve activity by regulating the expression of neuro-inflammatory factor, mediate left heart dysfunction and increase the susceptibility to ventricular fibrillation. Overall design: To investigate the role of PVN microglial cell activation in stress cardiomyopathy, we established a rat model of stress cardiomyopathy using immobilized stress, and microglial cells can be inhibited by minocycline. We collected PVN (the experiment was divided into three groups: model, minocycline, and control) for RNA- seq, comparing changes in gene expression in the RNA-seq data
Sample: C5brain, Control
SAMN40529857 • SRS20783645 • All experiments • All runs
Library:
Name: GSM8152689
Instrument: HiSeq X Ten
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: Total RNA was isolated using the Trizol Reagent (Invitrogen Life Technologies), after which the concentration, quality and integrity were determined using a NanoDrop spectrophotometer (Thermo Scientific). Three micrograms of RNA were used as input material for the RNA sample preparations. Sequencing libraries were generated using NEBNext® Ultra™ RNA Library Prep Kit for Illumina® (#E7530L, NEB, USA) following the manufacturer's recommendations and index codes were added to attribute sequences to each sample.
Runs: 1 run, 22.5M spots, 6.8G bases, 2Gb
Run# of Spots# of BasesSizePublished
SRR2838120422,542,7206.8G2Gb2024-04-01

ID:
32291988

Supplemental Content

Search details

See more...