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SRX23376583: GSM8033083: VSMC, NR4A3KO, H3K18LA Input; Mus musculus; OTHER
1 ILLUMINA (Illumina NovaSeq 6000) run: 3.9M spots, 969.1M bases, 248.9Mb downloads

External Id: GSM8033083_r1
Submitted by: Shanghai Jiaotong University
Study: Effect of depletion of NR4A3 on vascular calcification [CUTtag_H3K18LA]
show Abstracthide Abstract
Medial arterial calcification is a chronic systemic vascular disorder distinct from atherosclerosis and is commonly observed in patients with chronic kidney disease (CKD), diabetes mellitus, and aging individuals. We previously showed that orphan nuclear receptor NR4A3 is a key regulator in the progression of apolipoprotein (apo) A-IV-induced atherosclerosis; however, little is known about its role in vascular calcification. NR4A3 expression was upregulated in calcified aortic tissues from CKD mice or 1,25(OH)2VitD3 overload-induced mice, and in human calcified aorta. NR4A3 deficiency preserved VSMCs contractile phenotype, inhibited the expression of osteoblast differentiation-related genes, and reduced calcium deposition in the vasculature. Overall design: Comparative gene expression profiling analysis of RNA-seq data for WT VSMC and NR4A3 VSMC
Sample: VSMC, NR4A3KO, H3K18LA Input
SAMN39594726 • SRS20238506 • All experiments • All runs
Organism: Mus musculus
Library:
Name: GSM8033083
Instrument: Illumina NovaSeq 6000
Strategy: OTHER
Source: GENOMIC
Selection: other
Layout: PAIRED
Construction protocol: Total RNA was extracted from the cultured cell samples using TRIzol Reagent. RNA quality and quantity were measured using the RNA Nano 6000 Assay Kit of the Bioanalyzer 2100 system Libraries were sequenced on Illumina Nova-PE150, and 150-bp paired-end reads were generated
Runs: 1 run, 3.9M spots, 969.1M bases, 248.9Mb
Run# of Spots# of BasesSizePublished
SRR277101463,927,771969.1M248.9Mb2024-05-11

ID:
31596165

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