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SRX22066366: GSM7836931: mLND5-1; Mus musculus; OTHER
1 ILLUMINA (NextSeq 2000) run: 278.3M spots, 34G bases, 10.8Gb downloads

External Id: GSM7836931_r1
Submitted by: Pediatrics, University of Pittsburgh
Study: Spatial microniches of IL-2 synergize with IL-10 to drive lung migratory Th2 cells in response to inhaled allergen [Curio]
show Abstracthide Abstract
The mechanisms that guide Th2 cell differentiation in barrier tissues are unclear but important for the development of allergic asthma. Using temporal, spatial and single cell transcriptomic tracking of house dust mite (HDM) specific T cells, we describe the molecular pathways driving allergen-specific Th2 cells. Early Blimp-1 expression occurs in a subset of CD4 T cells in the lymph node prior to lung migration driven by IL-10 from allergen-specific T cells, but was not required for GATA3 upregulation. Instead, IL-2 via STAT5 was required to directly repress Bcl6 and Bach2 to support GATA3 and Blimp-1 upregulation. Loss of Blimp-1 during priming in the lymph node ablated the formation of Th2 cells that migrate to the lung, indicating early Blimp-1 promotes the population of Th2 cells with migratory capability. Spatial microniches of IL-2 in the lymph node discriminate and support these earliest Blimp-1+ migratory Th2 cells, demonstrating that lymph node localization is a primary driver of differentiation. Our findings illuminate the molecular pathways for inhaled allergens to promote Th2 cells and identify an early requirement for IL-2 mediated spatial microniches and allergen-driven IL-10 from responding T cells that drive allergic asthma. Overall design: 1DER CD45.1 Tg T cells were adoptively transferred to CD45.2 host, followed by intrasnasal immunization with 25ug of house dust mite daily for three days. Mediastinal lymph nodes (mLN) were isolated on day 4 and day 6, snap frozen and embedded in OCT for Curio Biosciences Slide Seeker Tile (3mm x 3mm).
Sample: mLND5-1
SAMN37776922 • SRS19136537 • All experiments • All runs
Organism: Mus musculus
Library:
Name: GSM7836931
Instrument: NextSeq 2000
Strategy: OTHER
Source: TRANSCRIPTOMIC
Selection: other
Layout: PAIRED
Construction protocol: Tile was removed and placed in a 1.5ml Eppendorf LoBind tube with Hybridization Reaction Mix. Reverse transcription was performed to generate cDNA followed by tissue clearing and Curio Seeker Bead resuspension. Second stand synthesis was done followed by cDNA amplification, which after purifiying was subjected to tagmentation (Nextera XT) and library generation
Runs: 1 run, 278.3M spots, 34G bases, 10.8Gb
Run# of Spots# of BasesSizePublished
SRR26358977278,335,42834G10.8Gb2024-02-21

ID:
29996337

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