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SRX20918233: GSM7573114: normal tissues of patient 3; Homo sapiens; RNA-Seq
4 ILLUMINA (NextSeq 500) runs: 496.1M spots, 148.8G bases, 54.6Gb downloads

External Id: GSM7573114_r1
Submitted by: SHUTCM
Study: Gene expression profile at single cell level of pair human mucinous colorectal adenocarcinoma(MCA) tissues and adjacent normal colon tissues
show Abstracthide Abstract
We provided a comprehensive landscape of tumor tissues and normal counterparts for MCA in a single-cell resolution level Overall design: Six pair tumor and normal samples were collected from changzheng hospital, naval medical university of China, with written informed consent of patients
Sample: normal tissues of patient 3
SAMN36339688 • SRS18192793 • All experiments • All runs
Organism: Homo sapiens
Library:
Name: GSM7573114
Instrument: NextSeq 500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC SINGLE CELL
Selection: cDNA
Layout: PAIRED
Construction protocol: Fresh normal mucosa and MCA tissue were washed with ice-cold PBS and minced into small pieces. Then the normal and tumor tissue pieces were digested with collagenase VIII at 0.38 mg/mL and DNase I at 0.1 mg/mL in 30% FBS for 1.0h at 37 °C. After digestion, tissue pieces were washed with PBS twice. Library was constructed according to the manufacter's instructions (single cell 3' V2 protocol 10 X genomics)
Runs: 4 runs, 496.1M spots, 148.8G bases, 54.6Gb
Run# of Spots# of BasesSizePublished
SRR25170154131,987,19739.6G14.5Gb2024-04-28
SRR2517015544,254,28613.3G4.9Gb2024-04-28
SRR25170156170,972,96351.3G18.8Gb2024-04-28
SRR25170157148,894,83744.7G16.4Gb2024-04-28

ID:
28351084

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