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SRX20761936: GSM7507042: LO3_HN_RHIZO_ROOT_1; Zea mays; RNA-Seq
1 ILLUMINA (Illumina NovaSeq 6000) run: 18.6M spots, 4.6G bases, 1.4Gb downloads

External Id: GSM7507042_r1
Submitted by: IPS2, INRA - CNRS - UPSUD
Study: responses of maize to the arbuscular fungus rhizophagus irregularis mitigate n deficiency stress-Physiological and molecular responses of maize to the arbuscular mycorrhizla fungus 5AMF) Rhizophagus irregularis mitigate nitrogen deficiency stress.
show Abstracthide Abstract
ngs2021_19_rhizophagus-responses of maize to the arbuscular fungus rhizophagus irregularis mitigate n deficiency stress-What is the impact of Rhizophagus irregularis on maize transcriptome under different N nutrition conditions, what is the impact of N on R. irregularis transcriptome in maize roots.-After 4 days of germination, maize seeds were sown in pots filled with sterile mix 1:1 clay beads:unfertilized peat. Inoculation performed in 3 times with Rhizohphagus irregularis spores purchased at Agronutrition. First inoculation perfomed with 500 spores/plant at sowing. Two other incoulations performed the following week and 2 weeks later with 100 spore per plant each. Overall design: 48 samples with 3 biological replicats. fungal gene expression in roots,dose response,genotype comparison
Sample: LO3_HN_RHIZO_ROOT_1
SAMN35879782 • SRS18050230 • All experiments • All runs
Organism: Zea mays
Library:
Name: GSM7507042
Instrument: Illumina NovaSeq 6000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: LO3_HN_RHIZO_ROOT_1(1ug) rna_selection:selection polyA, paired-end, stranded:yes, Protocol:PT_Illumina_Stranded_mRNA_Ligation_Prep_Demi-volume_input250ng_B_17-11-2021.docx
Runs: 1 run, 18.6M spots, 4.6G bases, 1.4Gb
Run# of Spots# of BasesSizePublished
SRR2500656018,586,6604.6G1.4Gb2023-12-13

ID:
28192665

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