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SRX20657915: GSM7472970: OCT4-GFP negative somatic cells, saline control, biological rep 1, female; Mus musculus; RNA-Seq
1 ILLUMINA (Illumina NovaSeq 6000) run: 20.6M spots, 6.2G bases, 1.8Gb downloads

External Id: GSM7472970_r1
Submitted by: UCSF
Study: Differential susceptibility of male and female germ cells to glucocorticoid-mediated signaling [RNAseq_DEX_Female]
show Abstracthide Abstract
While physiologic stress has long been known to impair mammalian reproductive capacity through hormonal dysregulation, mounting evidence now suggests that stress experienced prior to or during gestation may also negatively impact the health of future offspring. Rodent models of gestational physiologic stress can induce neurologic and behavioral phenotypes that persist for up to three generations, suggesting that stress signals can induce lasting epigenetic changes in the germline. Treatment with glucocorticoid stress hormones is sufficient to recapitulate the transgenerational phenotypes seen in physiologic stress models. These hormones are known to bind and activate the glucocorticoid receptor (GR), a ligand-inducible transcription factor, thus implicating GR-mediated signaling as a potential contributor to the transgenerational inheritance of stress-induced phenotypes. Here we demonstrate dynamic spatiotemporal regulation of GR expression in the mouse germline, showing expression in the fetal oocyte as well as the perinatal and adult spermatogonia. Functionally, we find that fetal oocytes are intrinsically buffered against changes in GR signaling, as neither genetic deletion of GR nor GR agonism with dexamethasone altered the transcriptional landscape or the progression of fetal oocytes through meiosis. In contrast, our studies revealed that the male germline is susceptible to glucocorticoid-mediated signaling, specifically by regulating RNA splicing within the spermatogonia, although this does not abrogate fertility. Together, our work suggests a sexually dimorphic function for GR in the germline, and represents an important step towards understanding the mechanisms by which stress can modulate the transmission of genetic information through the germline. Overall design: To investigate the role of glucocorticoid signaling in female germ cells, we performed RNA-seq on germ cells and somatic cells of the ovary following administration of the glucocorticoid receptor agonist, dexamethasone (dex). Pregnant dams were dosed by IP with 10 µg dex / gram (or saline vehicle) at E12.5, E13.5, E14.5, and E15.5. Ovaries were harvested at E15.5, and germs cells (OCT4-GFP positive) and somatic cells (OCT4-GFP negative) were FACS sorted prior to performing bulk RNA-seq.
Sample: OCT4-GFP negative somatic cells, saline control, biological rep 1, female
SAMN35713994 • SRS17955122 • All experiments • All runs
Organism: Mus musculus
Library:
Name: GSM7472970
Instrument: Illumina NovaSeq 6000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: RNA was harvested using RNeasy Micro Kit (QIAgen) mRNA was purified from total RNA using poly-dT beads, fragmented, and then used for first strand cDNA sythesis with random hexamer primers (followed by second strand cDNA synthesis). Fragments were end repaired, A-tailed, ligated to sequencing adapters, size selected, PCR amplified, and libraries purified. Libraries were quantified on Qubit and QC'ed on Agilent Bioanalyzer for quality and size distribution.
Runs: 1 run, 20.6M spots, 6.2G bases, 1.8Gb
Run# of Spots# of BasesSizePublished
SRR2489569620,625,7766.2G1.8Gb2023-06-13

ID:
28087288

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