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SRX20546163: GSM7434661: SKOV3, DMSO-2; Homo sapiens; RNA-Seq
1 ILLUMINA (Illumina HiSeq 4000) run: 24.4M spots, 8.7G bases, 3.8Gb downloads

External Id: GSM7434661_r1
Submitted by: Cancer Science Institute Singapore, National University of Singapore
Study: The effect of inhibition of receptor tyrosine kinase AXL on DNA damage response in ovarian cancer
PRJNA977954 • SRP440323 • All experiments • All runs
show Abstracthide Abstract
To explore molecular alterations upon AXL inhibition and the functions that might be regulated by AXL and SAM68 Overall design: Next, we performed RNA-sequencing on OV cells treated with DMSO or R428, OV cells with AXL knockout and OV cells with SAM68 KO to map out common biological processes distinctive to respective cell type and to compare their gene expression profile We performed gene expression profiling analysis using data obtained from RNA-seq of 1 cell line treated with AXL inhibition at two time points, AXL knockout cell line and SAM68 knockout cell line
Sample: SKOV3, DMSO-2
SAMN35539142 • SRS17853054 • All experiments • All runs
Organism: Homo sapiens
Library:
Name: GSM7434661
Instrument: Illumina HiSeq 4000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: Cells were first harvested by trypsinization and cell pellet was subjected to RNA extraction according to the protocol provided in AllPrep DNA/RNA mini kit (Qiagen). RNA was then quantified using NanoDrop™ 2000 Spectrophotometer. RNA samples were prepared for library preparation at 2.0ug per sample.
Runs: 1 run, 24.4M spots, 8.7G bases, 3.8Gb
Run# of Spots# of BasesSizePublished
SRR2477141924,378,7768.7G3.8Gb2023-06-28

ID:
27970222

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