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SRX20525337: GSM7430937: OPC_Dor; Rattus norvegicus; OTHER
1 ILLUMINA (Illumina NovaSeq 6000) run: 8.1M spots, 2.4G bases, 902.4Mb downloads

External Id: GSM7430937_r1
Submitted by: State Key Laboratory of Biotherapy, Sichuan University
Study: Dor regulates alpha-KG metabolic pathways in mature oligodendrocytes to enhance myelination and reverse age-related remyelination decline [CUT&Tag]
show Abstracthide Abstract
Impairment of oligodendrocyte (OL) myelinogenic potential, rather than inability of oligodendrocyte precursors to differentiate, is implicated in remyelination failure in demyelinating diseases such as multiple sclerosis. However, the mechanisms underlying myelinogenesis and age-related decline in remyelination remain elusive. Here, we identify a mature-OL-active transcriptional regulator Dor as a critical mediator of CNS myelination and remyelination. Genomic occupancy and transcriptomic analyses revealed that Dor interacts with Sox10 and targets the enhancers of myelinogenesis-regulatory genes including a newly identified OL-enriched nuclear factor Prr18 required for OL maturation. Metabolomic profiling showed that Dor is critical for alpha-ketoglutarate (alpha-KG) production and lipid biosynthesis. Supplementation with alpha-KG enhanced lipid biosynthesis and restored OL maturation defects in Dor-mutant mice while reversing the age-associated decline in remyelination efficiency and memory deficits in aging mice. Thus, our findings connect the OL-active Dor regulatory activity to alpha-KG-mediated lipid metabolism in mature OLs to thereby facilitate myelin production and remyelination. Overall design: Using CUT&Tag to inverstigate genomic occupancy of Dor for OPC, iOL(D1) and mOL(D3).
Sample: OPC_Dor
SAMN35439814 • SRS17834781 • All experiments • All runs
Library:
Name: GSM7430937
Instrument: Illumina NovaSeq 6000
Strategy: OTHER
Source: GENOMIC
Selection: other
Layout: PAIRED
Construction protocol: Cut&Tag libraries preparing and sequencing. To prepare sequencing libraries of Cut&Tag, fresh specimens from rat were processed following the protocol of Hieff NGS® G-Type In-Situ DNA Binding Profiling Library Prep Kit for Illumina® (Yeasen Biotech Co., Ltd.). Library concentration was measured using Qubit® 2.0 Fluorometer (Life Technologies, CA, USA), and library fragment analysis was assessed using the Bioanalyzer 2100 system (Agilent Technologies, CA, USA). Qualified libraries were sequenced on Novaseq 6000 sequencer (Illumina) with 150 bp paired-end reads.
Runs: 1 run, 8.1M spots, 2.4G bases, 902.4Mb
Run# of Spots# of BasesSizePublished
SRR247486808,129,4512.4G902.4Mb2024-07-04

ID:
27949046

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