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SRX20452838: GSM7398580: HH24, rep 1; Gallus gallus; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2000) run: 12.6M spots, 1.3G bases, 550.7Mb downloads

External Id: GSM7398580_r1
Submitted by: The University of Sheffield
Study: RNA sequencing of chicken limb distal mesenchyme to compare gene expression over time and in heterochronic grafted cells.
show Abstracthide Abstract
Distal limb mesenchyme cells were collected from embryonic chickens at Hamburger Hamilton (HH) stages HH24 and HH27, and from samples that had been grafted from HH20 to HH24 and left to develop for 24 hours. Bioinformatics and clustering analyses were then performed to determine whether grafted cells are more similar to HH24 (graft stage) or HH27 (host stage). Overall design: Comparative gene expression profiling analysisand clustering analyses of RNA-seq data for distal limb bud mesemchyme at different stages.
Sample: HH24, rep 1
SAMN35220710 • SRS17748647 • All experiments • All runs
Organism: Gallus gallus
Library:
Name: GSM7398580
Instrument: Illumina HiSeq 2000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: Total RNA was extracted from samples using Trizol-chloroform extractions. TrueSeq Stranded Total RNA and Ribo-Zero. Enzymatic fragmentation by Illumina Elute, Fragment, Prime mix.
Runs: 1 run, 12.6M spots, 1.3G bases, 550.7Mb
Run# of Spots# of BasesSizePublished
SRR2467322512,563,0681.3G550.7Mb2023-08-24

ID:
27875993

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