GSM7036273: ISC/EB RNAseq H1 RNAi C; Drosophila melanogaster; RNA-Seq - SRA

SRX19323457: GSM7036273: ISC/EB RNAseq H1 RNAi C; Drosophila melanogaster; RNA-Seq
1 ILLUMINA (Illumina NovaSeq 6000) run: 47.9M spots, 9.7G bases, 3.1Gb downloads

External Id: GSM7036273_r1

Submitted by: Institut Curie

Study: Chromatin state transitions in the Drosophila intestinal lineage reveal principles of cell type specification [RNA-seq]

PRJNA933189 • SRP421712 • All experiments • All runs

show Abstracthide Abstract

To investigate the chromatin state into an adult stem cell lineage, we generate cell-type specific chromatin state maps in the adult Drosophila intestine and identify principal chromatin state transitions during lineage determination. we profiled the binding sites of five chromatin-associated proteins from which the previously described five major types of chromatin. Overall design: Comparative chromatin accessibility (ATAC-seq) as well as gene expression (RNA-seq) in Drosophila ISC/EB in control and H1 RNAi conditions

Sample: ISC/EB RNAseq H1 RNAi C

SAMN33228250 • SRS16721439 • All experiments • All runs

Organism: Drosophila melanogaster

Library:

Name: GSM7036273

Instrument: Illumina NovaSeq 6000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: PAIRED

Construction protocol: RNA isolation and purification was then performed with the Arcturus PicoPure RNA Isolation kit (Thermofisher) RNA libraries were prepared with the Illumina Stranded mRNA Prep kit

Runs: 1 run, 47.9M spots, 9.7G bases, 3.1Gb

Run	# of Spots	# of Bases	Size	Published
SRR23385157	47,923,638	9.7G	3.1Gb	2023-10-26

ID:: 26571993

SRA

Sequence Read Archive

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