GSM6731007: Whole blood, COVID positive, rep 146; Homo sapiens; RNA-S... - SRA

SRX18257594: GSM6731007: Whole blood, COVID positive, rep 146; Homo sapiens; RNA-Seq
1 ILLUMINA (Illumina NovaSeq 6000) run: 130.1M spots, 39G bases, 12.4Gb downloads

Submitted by: NCBI (GEO)

Study: COVID-19 patient samples collected by the PREDICT-19 consortium

PRJNA901461 • SRP407875 • All experiments • All runs

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To investigate the role of gene expression in patients with COVID-19. Full article available at DOI: 10.1136/bmjopen-2020-044497. Overall design: Comparative gene expression profiling analysis of patients wiith COVID-19 and control samples

Sample: Whole blood, COVID positive, rep 146

SAMN31714551 • SRS15751764 • All experiments • All runs

Organism: Homo sapiens

Library:

Instrument: Illumina NovaSeq 6000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: PAIRED

Construction protocol: Total RNA was isolated from whole blood samples stored and stabilized in PAXgene RNA tubes according to the manufacturer's guidelines (PreAnalytiX) Libraries were prepared with 300ng of total RNA per sample using the Illumina Stranded Total RNA Prep with Ribo-Zero Plus (RZP) as per manufacturer instructions (Illumina, CA, USA).

Experiment attributes:

GEO Accession: GSM6731007

Links:

NCBI link: NCBI Entrez (gds)

Runs: 1 run, 130.1M spots, 39G bases, 12.4Gb

Run	# of Spots	# of Bases	Size	Published
SRR22283440	130,099,745	39G	12.4Gb	2023-01-31

ID:: 25242334

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