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SRX18243592: GSM6729129: TCR-seq_TD3; Mus musculus; OTHER
1 ILLUMINA (NextSeq 1000) run: 2.2M spots, 327.9M bases, 100.7Mb downloads

External Id: GSM6729129_r1
Submitted by: Ludwig Cancer Institute, UNIL
Study: Immunoediting instructs tumor metabolic reprogramming to support immune evasion [TCR-seq]
show Abstracthide Abstract
Immunoediting sculpts immunogenicity and thwarts host anti-tumor responses in tumor cells during tumorigenesis; however, it remains unknown whether metabolic programming of tumor cells can be guided by immunosurveillance. Here, we report that T cell-mediated immunosurveillance in early staged tumorigenesis instructs c-Myc upregulation and metabolic reprogramming in tumor cells. This previously unexplored tumor-immune interaction is controlled by a non-canonical IFNg-STAT3 signaling and supports tumor immune evasion. Our findings uncover that immunoediting instructs deregulated bioenergetic programs in tumor cells for empowering them to disarm the T cell-mediated immunosurveillance by imposing metabolic tug-of-war between tumor and infiltrating T cells and forming the suppressive tumor microenvironment. Overall design: Examination of CD8 T cell receptor répertoire in tumor-infiltrating lymphocytes from tumor with or without early T cell depletion
Sample: TCR-seq_TD3
SAMN31701416 • SRS15739317 • All experiments • All runs
Organism: Mus musculus
Library:
Name: GSM6729129
Instrument: NextSeq 1000
Strategy: OTHER
Source: TRANSCRIPTOMIC
Selection: other
Layout: SINGLE
Construction protocol: TILs were lysis by Lysis/Binding Buffer for mRNA purification. Murine TCR beta-chain specific primer was used for amplification
Runs: 1 run, 2.2M spots, 327.9M bases, 100.7Mb
Run# of Spots# of BasesSizePublished
SRR222674152,171,844327.9M100.7Mb2022-11-15

ID:
25228182

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