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SRX17869262: GSM6634317: 12663; Plasmodium berghei; Mus musculus; RNA-Seq
1 ILLUMINA (NextSeq 500) run: 15.7M spots, 2.3G bases, 786.6Mb downloads

External Id: GSM6634317_r1
Submitted by: RTS, NIAID, NIH
Study: Cerebral malaria is regulated by host mediated changes in Plasmodium gene expression
show Abstracthide Abstract
Cerebral Malaria (CM), the deadliest complication of Plasmodium infection, is a complex and unpredictable disease. Currently, our understanding of the factors that trigger progression of malaria to CM is limited. Here, by infecting experimental CM (ECM) resistant (Balb/c) and ECM susceptible (C57BL/6) mice with ECM causing (ANKA) and non-ECM causing (NK65) Plasmodium berghei (Pb) parasite strains, we revealed that in resistant host, infection by ECM causing parasite develops similar to infection by non-ECM causing parasite in susceptible host in terms of parasite growth in host, disease course and host immune response against parasite. Our comparative gene expression analysis revealed that in Balb/c host, gene expression of Pb ANKA parasite is remarkably different from, the gene expression of Pb ANKA in C57BL/6 but similar to the gene expression of non-ECM causing Pb NK65 in C57BL/6. Thus, host has a critical influence on parasite behavior which ultimately determines the course of malaria disease. Overall design: different treatments of Plasmodium compared
Sample: 12663
SAMN31260991 • SRS15387517 • All experiments • All runs
Library:
Name: GSM6634317
Instrument: NextSeq 500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: Mouse cheek blood samples were mixed with Trizol LS (Thermofisher) in 1:3 ratio and RNA was isolated according to manufacturer's guidelines TruSeq Total RNA-Seq, Globin-zero
Runs: 1 run, 15.7M spots, 2.3G bases, 786.6Mb
Run# of Spots# of BasesSizePublished
SRR2188222615,695,0802.3G786.6Mb2023-02-21

ID:
24800124

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