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SRX16660589: GSM6387646: HASMC,NC mimic, sample 3; Homo sapiens; RNA-Seq
1 OXFORD_NANOPORE (PromethION) run: 9.8M spots, 8G bases, 6.5Gb downloads

External Id: GSM6387646_r1
Submitted by: Precision Research Center for Refractory Diseases, Institute for Clinical Research, Shanghai General Hospital
Study: Effect of PDGF, TGF-ß and miR-221 on gene expression during proliferation and differentiation of human aortic smooth muscle cells
show Abstracthide Abstract
To investigate the key molecular and mechanism during the proliferation and differentiation of human aortic smooth muscle cells, we treated HASMC cell lines with PDGF, TGF-ß and miR-221.We then performed gene expression profiling analysis using data obtained from ONT long-read RNA-seq of 4 different treatment. Overall design: Comparative gene expression profiling analysis of RNA-seq data for control HASMC cells and 3 different treatments (PDGF, TGF-ß and miR-221).
Sample: HASMC,NC mimic, sample 3
SAMN29953746 • SRS14293846 • All experiments • All runs
Organism: Homo sapiens
Library:
Name: GSM6387646
Instrument: PromethION
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Construction protocol: miR-221 was transfected 24h after HASMC adherence and incubated for 48h RNA libraries for RNA-seq were prepared using SMARTER mRNA-Seq Library Prep Kit following manufacturer's protocols.
Runs: 1 run, 9.8M spots, 8G bases, 6.5Gb
Run# of Spots# of BasesSizePublished
SRR206374169,771,1908G6.5Gb2022-07-26

ID:
23390045

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