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SRX1629236: GSM2086294: sh3 DHT 1 AR; Homo sapiens; ChIP-Seq
1 ILLUMINA (NextSeq 500) run: 22.9M spots, 1.7G bases, 617.5Mb downloads

Submitted by: NCBI (GEO)
Study: AR and ERG ChIP-seq in presence or absence of PRMT5
show Abstracthide Abstract
Replicates of ChIP seq data using AR and ERG antibodies from VCaP cell lines harboring inducible shRNA constructs for PRMT5 (3 independent, sh1, sh2, sh3) and 1 non targeting control (NTC), all sample stimulated with ligand, either DHT or R1881 Overall design: AR ChIPseq in VCaP cells, 3 replicates each of DHT stimulated cells with one of 4 inducible shRNA constructs, sh1, sh2, sh3 targeting PRMT5 or NTC non targeting controls. Furthermore 2 AR ChIPseq in the same system stimulated with R1881 for targeting constructs sh1, sh2 and NTC. ERG ChIPseq 2 replicates DHT stimulated, each of sh1, sh2, sh3 constructs. Cells where induced (doxycyclin) for shRNA expression on day0, hormone starved on day3 and harvested on day5.
Sample: sh3 DHT 1 AR
SAMN04546545 • SRS1336899 • All experiments • All runs
Organism: Homo sapiens
Library:
Instrument: NextSeq 500
Strategy: ChIP-Seq
Source: GENOMIC
Selection: ChIP
Layout: SINGLE
Construction protocol: ChIP protocol - Purification using Magio beads Kapa HTP library preparation kit on a Sciclone NGS workstation using MagBio beads
Experiment attributes:
GEO Accession: GSM2086294
Links:
Runs: 1 run, 22.9M spots, 1.7G bases, 617.5Mb
Run# of Spots# of BasesSizePublished
SRR322246122,864,8291.7G617.5Mb2016-05-20

ID:
2325972

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