GSM6266580: Tsu-0_W+N-_P3ID33_c; Arabidopsis thaliana; RNA-Seq - SRA

SRX15890334: GSM6266580: Tsu-0_W+N-_P3ID33_c; Arabidopsis thaliana; RNA-Seq
1 ILLUMINA (NextSeq 500) run: 16.6M spots, 2.3G bases, 439.8Mb downloads

External Id: GSM6266580_r1

Submitted by: IJPB, INRAE

Study: Multi-omics profiling of 5 Arabidopsis accessions in response to combined water and nitrogen deficiencies

PRJNA852581 • SRP383489 • All experiments • All runs

show Abstracthide Abstract

In this study, we build an in-depth multi-omics profile of 5 Arabidopsis accessions, in order to find the inner relations of N deficit, mild drought, and combined stress response at the physiological, metabolic and transcriptional level. Overall design: Examination of 5 Arabidopsis accessions in response to 3 stress conditions

Sample: Tsu-0_W+N-_P3ID33_c

SAMN29334530 • SRS13579443 • All experiments • All runs

Organism: Arabidopsis thaliana

Library:

Name: GSM6266580

Instrument: NextSeq 500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: SINGLE

Construction protocol: total RNAs were isolated from the RNeasy Plant Mini kit (Qiagen) following the manufacturer's recommendations. RNA-seq libraries were constructed by the POPS platform (IPS2) using the TruSeq Stranded mRNA library prep kit (Illumina®, California, U.S.A.) according to the supplier's instructions.

Runs: 1 run, 16.6M spots, 2.3G bases, 439.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR19846641	16,619,291	2.3G	439.8Mb	2024-07-10

ID:: 22550102

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