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SRX15471282: GSM6199393: mef2>NUAK548 muscle replicate 2; Drosophila melanogaster; RNA-Seq
1 ILLUMINA (Illumina HiSeq 4000) run: 21.4M spots, 6.4G bases, 2Gb downloads

External Id: GSM6199393_r1
Submitted by: Biochemistry and Molecular Biophysics, Kansas State University
Study: Gene expression profiling of NUAK kinase overexpression in Drosophila larval muscle development
show Abstracthide Abstract
Signal transduction pathways mediated by kinases control diverse biological outputs at the level of cells and tissues to regulate a diverse array of biological and developmental events. To gain insight into how muscle expression of the evolutionarily conserved NUAK kinase regulates the transcriptional landscape during Drosophila melanogaster development, we performed high-throughput sequencing of RNA from either whole larvae or dissected muscle fillets at the end of larval development. Raw data was generated using the Illumina HiSeq platform. After trimming and mapping to the Drosophila reference genome, differential gene expression and GO enrichment analysis were completed. Overall design: Comparative gene expression profiling analysis of RNA-seq data for mef2>lacZ control or NUAK (mef2>NUAK 548 or mef2>NUAK 550) overexpression samples. grant information: RO1 AR060788 Mechanisms Underlying Muscle Development and Maintenance in Drosophila, NIH/NIAMS
Sample: mef2>NUAK548 muscle replicate 2
SAMN28680942 • SRS13188369 • All experiments • All runs
Library:
Name: GSM6199393
Instrument: Illumina HiSeq 4000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: RNA was harvested using Rneasy mini plus kit (Qiagen). 2.0 ug of total RNA was used for the construction of sequencing libraries. Libraries for RNA-seq were prepared using NEBNext Ultra II RNA Library Prep Kit following manufacturer's protocols.
Runs: 1 run, 21.4M spots, 6.4G bases, 2Gb
Run# of Spots# of BasesSizePublished
SRR1941693721,377,1966.4G2Gb2022-05-30

ID:
22030829

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