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SRX1518388: GSM2028019: ZF_Uninjured_Fin_1; Danio rerio; RNA-Seq
3 ILLUMINA (Illumina Genome Analyzer II) runs: 41.9M spots, 2.1G bases, 1.3Gb downloads

Submitted by: NCBI (GEO)
Study: Transcription profiling of zebrafish fin regeneration
PRJNA307985 • SRP068114 • All experiments • All runs
show Abstracthide Abstract
We compared transcriptional profiles of regenerating zebrafish caudal fins following fin amputation with profiles from uninjured zebrafish caudal fins Overall design: Examination of whole fin transcriptional profiles from regenerating fins (2 pools of 10 fins) and uninjured fins (2 pools of 10 fins)
Sample: ZF_Uninjured_Fin_1
SAMN04385834 • SRS1236746 • All experiments • All runs
Organism: Danio rerio
Library:
Instrument: Illumina Genome Analyzer II
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Construction protocol: Either uninjured fins or fins at 4 days post amputation were collected. 10 fins were dissected, rinsed in PBS, placed in Trizol and homogenized. RNA was then extracted. Illumina RNA-Seq, 50 bp Single end libraries
Experiment attributes:
GEO Accession: GSM2028019
Links:
Runs: 3 runs, 41.9M spots, 2.1G bases, 1.3Gb
Run# of Spots# of BasesSizePublished
SRR308689216,000,000800M491Mb2016-04-10
SRR30868939,862,747493.1M305.6Mb2016-04-10
SRR308689416,000,000800M491.3Mb2016-04-10

ID:
2147982

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