U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX13374687: GSM5726831: HCHFD+PC rep3; Rattus norvegicus; RNA-Seq
1 ILLUMINA (Illumina NovaSeq 6000) run: 46.3M spots, 13.9G bases, 5Gb downloads

External Id: GSM5726831_r1
Submitted by: Tsinghua university
Study: RNA-Sequencing of rats treated with Chinese herbal medicine Pulsatilla Chinensis
show Abstracthide Abstract
Pulsatilla chinensis (PC) is a traditional Chinese medicinewith detoxification activities. It has been used for dysentery, vaginal trichomoniasis, bacterial infections and malignant tumor treatment. Gavage administration of PC in hyperlipidemia rats for 11 weeks resulted in obviously reduced serum total cholesterol, LDL-cholesterol and ameliorated fatty liver. So we wanted to further investigate the relationship between PC and lipid metabolism related pathways or genes Overall design: Analysis used normal diet treated rats as control samples for comparison to the model samples treated with high cholesterol-high fat diet ,and the treatment group with high cholesterol-high fat diet plus Pulsatilla Chinensis for comparison to the model samples treated with high cholesterol-high fat diet , genes expression changes were determined by RNA-Seq to determine Pulsatilla Chinensis responsive genes
Sample: HCHFD+PC rep3
SAMN23848731 • SRS11278925 • All experiments • All runs
Library:
Name: GSM5726831
Instrument: Illumina NovaSeq 6000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: Total RNA extracted using Trizol following manufacturer's instructions,Illumina TruSeq RNA Sample was used with 1 ug of total RNA for the construction of sequencing libraries. RNA libraries were prepared for sequencing using standard Illumina protocols
Runs: 1 run, 46.3M spots, 13.9G bases, 5Gb
Run# of Spots# of BasesSizePublished
SRR1719421046,339,88613.9G5Gb2023-12-01

ID:
18406450

Supplemental Content

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...