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SRX12727830: GSM5645879: 1h_Hpx_Control_rep2; Homo sapiens; ATAC-seq
1 ILLUMINA (Illumina NovaSeq 6000) run: 112M spots, 11.4G bases, 3.3Gb downloads

Submitted by: NCBI (GEO)
Study: Regulation of Chromatin Accessibility by hypoxia and HIF_1
show Abstracthide Abstract
ATAC-seq was performed to investigate changes in chromatin accessibility in repsonse to hypoxia Overall design: HeLa cells were grown at 21% oxygen, treated with control and HIF1B siRNA and exposed to 1% oxygen (hypoxia) for 0, 1 and 24 hs. HeLa cells were also grown at 21% oxygen, treated with control siRNA and exposed to 1% oxygen for 24 hs followed by reoxygenation at 21% oxygen for 1 h. ATAC-seq was used to determine chromatin accessibility changes.
Sample: 1h_Hpx_Control_rep2
SAMN22486714 • SRS10676764 • All experiments • All runs
Organism: Homo sapiens
Library:
Instrument: Illumina NovaSeq 6000
Strategy: ATAC-seq
Source: GENOMIC
Selection: other
Layout: PAIRED
Construction protocol: Omni-ATAC protocol (Corces 2017) Standard ATAC-seq library construction
Experiment attributes:
GEO Accession: GSM5645879
Links:
Runs: 1 run, 112M spots, 11.4G bases, 3.3Gb
Run# of Spots# of BasesSizePublished
SRR16525207111,951,84711.4G3.3Gb2022-03-05

ID:
17328742

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