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SRX119325: GSM872894: V205G ChIP-Seq; Mus musculus; ChIP-Seq
2 ILLUMINA (Illumina Genome Analyzer II) runs: 57.6M spots, 2.1G bases, 1Gb downloads

Submitted by: Gene Expression Omnibus (GEO)
Study: Genome-wide analysis of the role of FOG-1 in GATA-1 chromatin occupancy
show Abstracthide Abstract
We report ChIP-Seq data for GATA-1 and the FOG-binding mutant of GATA-1 (GATA-1^V205G) in G1ME cells, a Gata1-null cell line with both erythroid and megakaryocytic differentiation potential. We introduced HA-tagged GATA-1 or V205G into G1ME cells via retroviral transduction. The cells were crosslinked at 48h post-transduction, and an HA antibody was used for chromatin immunoprecipitation (ChIP). ChIP and input samples were sequenced on Illumina GAII high-throughput sequencer. The data reveal GATA-1-specific and V205G-specific bidning sites, indicating that FOG-1 both faacilitates and prohibits GATA-1 chromatin occupancy in a context-dependent manner. Overall design: Examinaton of chromatin occupancy of GATA-1 anda FOG-binding mutant of GATA-1 in G1ME cells cultured in TPO.
Sample: V205G ChIP-Seq
SAMN00783983 • SRS291595 • All experiments • All runs
Organism: Mus musculus
Library:
Name: GSM872894: V205G ChIP-Seq
Instrument: Illumina Genome Analyzer II
Strategy: ChIP-Seq
Source: GENOMIC
Selection: ChIP
Layout: SINGLE
Spot descriptor:
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Experiment attributes:
GEO Accession: GSM872894
Links:
External link:
Runs: 2 runs, 57.6M spots, 2.1G bases, 1Gb
Run# of Spots# of BasesSizePublished
SRR40741022,308,362803.1M319.4Mb2012-07-30
SRR40741135,275,0301.3G749.1Mb2012-07-30

ID:
137336

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