U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX11579451: GSM5481556: PL4, rep3; Mus musculus; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2500) run: 46.2M spots, 9.3G bases, 4.2Gb downloads

Submitted by: NCBI (GEO)
Study: Identifying main functional pathways associated with cognitive resilience to Alzheimer ´s Disease
show Abstracthide Abstract
Understanding the mechanisms involved in cognitive resilience in Alzheimer's disease (AD) represents a promising strategy to identify novel treatments for dementia in AD. Previous findings from our group revealed that the study of aged-Tg2576 cognitive resilient individuals is a suitable tool for this purpose. Here, by performing a transcriptomic analysis of the prefrontal cortex of demented and resilient Tg2576 mice, we have been able to hypothesize that pathways involved in inflammation, amyloid degradation, memory function and neurotransmission may be playing a role on cognitive resilience in AD. Intriguingly, the results obtained in this study are suggestive of a reduction of the influx of peripheral immune cells into the brain on cognitive resilient subjects. Indeed, Cd4 mRNA expression is significantly reduced on Tg2576 mice with cognitive resilience and interestingly, we have found a negative correlation between CD4 mRNA levels in the periphery and the score in the Mini-Mental State Exam of AD patients. All of this, highlights the importance of understanding the role of the immune system on the development of neurodegenerative diseases and points out to the infiltration of CD4+ cells in the brain as a key player of cognitive dysfunction in AD. Overall design: Comparison of transcripts in the frontal cortex between good learner (GL) or resilient and poor learner (PL) or memory impaired trasngenic Alzheimer´s disease (AD) mice
Sample: PL4, rep3
SAMN20441706 • SRS9633689 • All experiments • All runs
Organism: Mus musculus
Library:
Instrument: Illumina HiSeq 2500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: Frontal cortex were removed, flash frozen on dry ice, and RNA was harvested using Trizol reagent. Illumina TruSeq RNA Sample Prep Kit (Cat#FC-122-1001) was used with 1 ug of total RNA for the construction of sequencing libraries. RNA libraries were prepared for sequencing using standard Illumina protocols
Experiment attributes:
GEO Accession: GSM5481556
Links:
Runs: 1 run, 46.2M spots, 9.3G bases, 4.2Gb
Run# of Spots# of BasesSizePublished
SRR1527441746,181,8069.3G4.2Gb2023-09-19

ID:
15492220

Supplemental Content

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...