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SRX11464902: GSM5454798: PC-FTAZ:PCBM-3; Lactuca sativa; RNA-Seq
1 DNBSEQ (DNBSEQ-G50) run: 55M spots, 8.2G bases, 4.8Gb downloads

Submitted by: NCBI (GEO)
Study: Transcriptome of red oak leaf lettuce grown under OSC filters
show Abstracthide Abstract
To characterize plant growth in net zero energy greenhouse models with semi-transparent organic solar cell (OSC) filter roofs, RNA was extracted from red oak leaf lettuce leaves grown under 3 OPV filters (FTAZ:IT-M, PTB7-Th:IEICO-4F, FTAZ:PCBM) an clear and shaded glass controls. 2 light intensity experiments were used. PPPFD Controlled (PC) treatments had a constant light intensity and different light spectra created by the filters. Height Controlled (HC) treatments varied in both light intensity and spectra, according to the light transmission of each filter. When light intensity was controlled, plants grown under FTAZ:IT-M had a DEG profile distinct from plants grown under the other 2 filters. Key genes were up or down-regulated that indicate changes in anthocyanin accumulation, nitrogen metabolism and pest defense. Overall design: Leaf tissue mRNA sampled from 4 individual plants grown under 1 of 8 light spectra and intensity conditions The Sample title and characteristics were updated on June 14, 2022.
Sample: HC-FTAZ:PCBM-3
SAMN20248944 • SRS9504955 • All experiments • All runs
Organism: Lactuca sativa
Library:
Instrument: DNBSEQ-G50
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: TRIzol + PureLink RNA Mini kit, on-column DNAse and DNAse I treatment Library was prepared by BGI Genomics Co., Ltd., poly A selection with oligo dT library, all 32 samples were pooled and loaded into all 3 lanes
Links:
Runs: 1 run, 55M spots, 8.2G bases, 4.8Gb
Run# of Spots# of BasesSizePublished
SRR1515705454,999,7128.2G4.8Gb2021-07-22

ID:
15332708

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