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SRX11407626: GSM5436524: Lipoma-derived adipocytes sporadic replicate2; Homo sapiens; RNA-Seq
1 ILLUMINA (Illumina HiSeq 4000) run: 61.9M spots, 18.6G bases, 5.3Gb downloads

Submitted by: NCBI (GEO)
Study: scRNA-seq of stromal vascular fraction (SVF) of lipoma and bulk RNA-seq of lipoma-derived adipocytes.
PRJNA745464 • SRP327858 • All experiments • All runs
show Abstracthide Abstract
We determined the gene signatures of adipocytes differentiated from lipoma SVF. Furthermore, single-cell RNA-sequencing was performed for SVF from inherited (familial) and sporadic lipoma. Overall design: Patients undergoing surgical excision of lipomas were identified and the dermatologist clinically confirmed the diagnosis of lipoma. Tissues was enzymaticaly digested and SVF was obtained and diffrentiated in adipogenic media for 5-7 days before collection of the RNA.
Sample: Lipoma-derived adipocytes sporadic replicate2
SAMN20166669 • SRS9451320 • All experiments • All runs
Organism: Homo sapiens
Library:
Instrument: Illumina HiSeq 4000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: Stromal Vascular Fraction (SVF) was isolated from lipomas using our published protocol. (Aune et al., 2013 PMID: 23568137) 10X genomics snRNA-seq library construction protocol
Experiment attributes:
GEO Accession: GSM5436524
Links:
Runs: 1 run, 61.9M spots, 18.6G bases, 5.3Gb
Run# of Spots# of BasesSizePublished
SRR1509777961,928,95718.6G5.3Gb2021-07-22

ID:
15264599

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