GSM5414199: 116_siSP1; Homo sapiens; RNA-Seq - SRA

SRX11333336: GSM5414199: 116_siSP1; Homo sapiens; RNA-Seq
1 ILLUMINA (HiSeq X Ten) run: 23.9M spots, 6.9G bases, 2.1Gb downloads

Submitted by: NCBI (GEO)

Study: Identification of differential expressed genes after SP1 or SP3 knockdown in colorectal cancer cells

PRJNA743222 • SRP326629 • All experiments • All runs

show Abstracthide Abstract

SP1 and SP3 have been reported to play an critical role in the pregression of tumors. In order to elucidate the molecular mechanism of SP1 and SP3 in colorectal cancer, RNA-seq analysis was performed on SP1 and SP3 knockdown and control HCT116 cells. Overall design: HCT116 cells with SP1 or SP3 knockdown were generated by siRNAs.

Sample: 116_siSP1

SAMN20003686 • SRS9375335 • All experiments • All runs

Organism: Homo sapiens

Library:

Instrument: HiSeq X Ten

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: PAIRED

Construction protocol: RNA was harvested using Trizol reagent. RNA libraries were prepared for sequencing using standard Illumina protocols

Experiment attributes:

GEO Accession: GSM5414199

Links:

NCBI link: NCBI Entrez (gds)

Runs: 1 run, 23.9M spots, 6.9G bases, 2.1Gb

Run	# of Spots	# of Bases	Size	Published
SRR15021463	23,946,247	6.9G	2.1Gb	2024-07-01

ID:: 15110159

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Sequence Read Archive

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