U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX11137390: GSM5380606: Wing disc_AIDAux_replicate 2; Drosophila melanogaster; RNA-Seq
1 ILLUMINA (Illumina NovaSeq 6000) run: 26.4M spots, 7.7G bases, 2.4Gb downloads

Submitted by: NCBI (GEO)
Study: Inducible degradation of the Mediator subunit Med19 reveals a dedicated role in the regulation of developmental genes expression
show Abstracthide Abstract
In the Drosophila wing imaginal disc, by using a inductible degradable version of Med19 degradation with RNAseq, we got access to the early consequences of Med19 depletion on gene expression. We showed that less than a quarter of the genes expressed in the wing disc were deregulated after Med19 loss. Strikingly, these genes exhibit a spatio-temporal expression pattern like transcription factors or Notch responsive genes that reveals Med19 dedicated role in the regulation of developmental gene transcription. Overall design: RNAseq was done on drosophila wing discs from female ub> Med19AID L3 larvae that were either fed with Auxin analog NAA (AIDUbAux) to induce M19 degradation, or not (AIDUb) as a control. A second control was performed to monitor Auxin effect on drosophila wing discs from female Med19AID L3 larvae that were fed with Auxin (AIDAux).
Sample: Wing disc_AIDAux_replicate 2
SAMN19693942 • SRS9200514 • All experiments • All runs
Library:
Instrument: Illumina NovaSeq 6000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: Wing discs were hand-dissected at 4°C RNA extraction was made using TRIzol reagent. RNA Library was prepared using standard Illumina protocols for strand-specific RNA-seq with PolyA selection.
Experiment attributes:
GEO Accession: GSM5380606
Links:
Runs: 1 run, 26.4M spots, 7.7G bases, 2.4Gb
Run# of Spots# of BasesSizePublished
SRR1480470726,408,3377.7G2.4Gb2024-01-01

ID:
14822974

Supplemental Content

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...