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SRX11137388: GSM5380604: Wing disc_AIDUb_replicate 1; Drosophila melanogaster; RNA-Seq
1 ILLUMINA (Illumina NovaSeq 6000) run: 28.8M spots, 8.3G bases, 2.6Gb downloads

Submitted by: NCBI (GEO)
Study: Inducible degradation of the Mediator subunit Med19 reveals a dedicated role in the regulation of developmental genes expression
show Abstracthide Abstract
In the Drosophila wing imaginal disc, by using a inductible degradable version of Med19 degradation with RNAseq, we got access to the early consequences of Med19 depletion on gene expression. We showed that less than a quarter of the genes expressed in the wing disc were deregulated after Med19 loss. Strikingly, these genes exhibit a spatio-temporal expression pattern like transcription factors or Notch responsive genes that reveals Med19 dedicated role in the regulation of developmental gene transcription. Overall design: RNAseq was done on drosophila wing discs from female ub> Med19AID L3 larvae that were either fed with Auxin analog NAA (AIDUbAux) to induce M19 degradation, or not (AIDUb) as a control. A second control was performed to monitor Auxin effect on drosophila wing discs from female Med19AID L3 larvae that were fed with Auxin (AIDAux).
Sample: Wing disc_AIDUb_replicate 1
SAMN19693946 • SRS9200513 • All experiments • All runs
Library:
Instrument: Illumina NovaSeq 6000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: Wing discs were hand-dissected at 4°C RNA extraction was made using TRIzol reagent. RNA Library was prepared using standard Illumina protocols for strand-specific RNA-seq with PolyA selection.
Experiment attributes:
GEO Accession: GSM5380604
Links:
Runs: 1 run, 28.8M spots, 8.3G bases, 2.6Gb
Run# of Spots# of BasesSizePublished
SRR1480470528,780,2738.3G2.6Gb2024-01-01

ID:
14822972

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