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SRX11036562: GSM5350283: Case25; Canis lupus familiaris; RNA-Seq
1 ILLUMINA (NextSeq 500) run: 26.2M spots, 2.2G bases, 836.6Mb downloads

Submitted by: NCBI (GEO)
Study: Transcriptome sequencing of Canine Acanthomatous Ameloblastoma samples
show Abstracthide Abstract
Characterize gene expression and variants between Canine Acanthomatous Ameloblastoma tumor samples and controls
Sample: Case25
SAMN19486437 • SRS9106495 • All experiments • All runs
Library:
Instrument: NextSeq 500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Construction protocol: Cryopreserved tissue was homogenized in Trizol on a bead mill using 2.8mm ceramic beads. Total RNA was isolated from the Trizol lysate, with an extra chloroform extraction to remove residual phenol and addition of glyco-blue as a carrier to promote RNA precipitation. RNA concentration was determined with a Nanodrop and integrity assessed on a Fragment Analyzer. Directional RNA-seq libraries were prepared from 250ng total RNA using the NEBNext Directional Ultra II RNA Library Prep Kit for Illumina (New England Biolabs), with initial polyA+ enrichment.
Experiment attributes:
GEO Accession: GSM5350283
Links:
Runs: 1 run, 26.2M spots, 2.2G bases, 836.6Mb
Run# of Spots# of BasesSizePublished
SRR1469848326,194,8572.2G836.6Mb2024-08-21

ID:
14682820

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