U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX10134056: GSM5093762: ABL5ug4; Nematostella vectensis; RNA-Seq
4 ILLUMINA (Illumina HiSeq 2500) runs: 4.3M spots, 431.2M bases, 131.1Mb downloads

Submitted by: NCBI (GEO)
Study: Impact of antibiotics, cell-free supernatant, LPS, and live cells on Nematostella vectensis gene expression
PRJNA703014 • SRP307143 • All experiments • All runs
show Abstracthide Abstract
We used bacteria isolated from field samples of Nematostella vectensis to quantify gene expression through comparisons of transcriptomes. Overall design: ntotal = 76. 19 conditions (4 replicates each) (19*4 = 76).
Sample: ABL5ug4
SAMN18000276 • SRS8288184 • All experiments • All runs
Organism: Nematostella vectensis
Library:
Instrument: Illumina HiSeq 2500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Construction protocol: Whole-organism RNA was extracted from animals (that were preserved in RNAlater and stored at -80) using Ambion RNAqueous extraction kit. Libraries were prepared as in Meyer et al. (2011).
Experiment attributes:
GEO Accession: GSM5093762
Links:
Runs: 4 runs, 4.3M spots, 431.2M bases, 131.1Mb
Run# of Spots# of BasesSizePublished
SRR13746975965,99397.6M30.1Mb2021-02-20
SRR137469761,060,110107.1M32.4Mb2021-02-20
SRR137469771,105,626111.7M33.8Mb2021-02-20
SRR137469781,137,237114.9M34.8Mb2021-02-20

ID:
13261632

Supplemental Content

Related information

Search details

See more...

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...