GSM1669170: MCF7_E2_Rep1; Homo sapiens; RNA-Seq - SRA

SRX1012782: GSM1669170: MCF7_E2_Rep1; Homo sapiens; RNA-Seq
4 ILLUMINA (Illumina HiSeq 2000) runs: 24.7M spots, 988.8M bases, 618.5Mb downloads

Submitted by: Gene Expression Omnibus (GEO)

Study: RNA-seq in two ER+ breast cancer cell lines with and without progestins

PRJNA282505 • SRP057758 • All experiments • All runs

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Exploring effect of progesterone/progestin treatment on gene expression Overall design: Two cell lines, three conditions (Full Media with E2, E2+ Progesterone, Full Media + R5020 Progestin)

Sample: MCF7_E2_Rep1

SAMN03570796 • SRS924603 • All experiments • All runs

Organism: Homo sapiens

Library:

Instrument: Illumina HiSeq 2000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: SINGLE

Construction protocol: Total RNA (miRNeasy kit, Qiagen) from the flow sorted cells was used to prepare libraries using the TruSeq RNA sample preparation kit (Illumina). as per instructions from the TruSeq RNA sample preparation kit

Experiment attributes:

GEO Accession: GSM1669170

Links:

External link: GEO Sample GSM1669170

NCBI link: NCBI Entrez (gds)

Runs: 4 runs, 24.7M spots, 988.8M bases, 618.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR2001056	5,664,990	226.6M	139.3Mb	2015-05-22
SRR2001057	4,934,654	197.4M	118.1Mb	2015-05-22
SRR2001058	6,866,718	274.7M	174.6Mb	2015-05-22
SRR2001059	7,253,012	290.1M	186.4Mb	2015-05-22

ID:: 1467634

SRA

Sequence Read Archive

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