Whole genome shotgun bisulfite sequencing of tomato immature fruits a... - SRA

SRX098271: Whole genome shotgun bisulfite sequencing of tomato immature fruits at 17 DPA
14 ILLUMINA (Illumina Genome Analyzer II) runs: 251.3M spots, 21.2G bases, 12.1Gb downloads

Submitted by: Boyce Thompson Institute

Study: whole genome shotgun bisulfite sequencing of tomato fruits

• SRP008329 • All experiments • All runs

show Abstracthide Abstract

Bisulfite sequencing of tomato leaves and fruits at four different developmental stages: immature at 17 days post anthesis (DPA), mature green at 39 DAP, early ripening or breaker at 42 DPA, and fully ripe at 52 DPA, as well as fruits (42 DPA) of ripening mutants, rin and cnr.

Sample: tomato immature fruit at 17 DPA

SAMN00722991 • SRS265086 • All experiments • All runs

Organism: Solanum lycopersicum

Library:

Name: IM

Instrument: Illumina Genome Analyzer II

Strategy: Bisulfite-Seq

Source: GENOMIC

Selection: RANDOM

Layout: SINGLE

Spot descriptor:

1 forward

Runs: 14 runs, 251.3M spots, 21.2G bases, 12.1Gb

Run	# of Spots	# of Bases	Size	Published
SRR346428	14,061,618	1.2G	706.6Mb	2011-10-03
SRR346429	14,360,127	1.2G	721.1Mb	2011-10-03
SRR346430	20,061,708	1.7G	1Gb	2011-10-03
SRR346431	20,469,020	1.7G	1.1Gb	2011-10-03
SRR346432	7,874,763	661.5M	414.2Mb	2011-10-03
SRR346433	10,917,304	917.1M	520.9Mb	2011-10-03
SRR346435	22,613,382	1.9G	1.1Gb	2011-10-03
SRR346436	11,460,152	962.7M	584.7Mb	2011-10-03
SRR346437	17,100,767	1.5G	789Mb	2011-10-03
SRR346438	13,804,406	1.2G	632.7Mb	2011-10-03
SRR346439	23,209,138	1.9G	1.1Gb	2011-10-03
SRR346440	25,068,642	2.1G	1.2Gb	2011-10-03
SRR346442	25,426,963	2.1G	1.2Gb	2011-10-03
SRR346443	24,857,989	2.1G	1.2Gb	2011-10-03

ID:: 113273

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity