The transcriptome of Rhytidocystis sp. 1 WS-2016 - SRA

SRX6640466: The transcriptome of Rhytidocystis sp. 1 WS-2016
1 ILLUMINA (Illumina HiSeq 4000) run: 32.4M spots, 9.7G bases, 4.3Gb downloads

Design: Total RNA was extracted by RNAqueous Micro Kit according to manufacturers instructions but without the DNase I digest step, then reverse-transcribed and amplified by using SMART-Seq v4 Ultra Low Input RNA Kit (20-30 amplification cycles; optimization was done as in SMARTer Pico PCR cDNA Synthesis Kit). Indexed TruSeq libraries were sequenced as paired-end 150 bp reads in two multiplexed lanes on the Illumina HiSeq 4000 machine (i.e., two runs were done of each sample).

Submitted by: University College London

Study: Transcriptomes of apicomplexan parasites

PRJNA557242 • SRP217116 • All experiments • All runs

show Abstracthide Abstract

Transcriptomes generated from individually isolated cells (1 to 80) of apicomplexan parasites of invertebrates for comparative studies. The data contains host and other contaminant sequences.

Sample:

SAMN12392361 • SRS5197547 • All experiments • All runs

Organism: Rhytidocystis sp. ex Travisia forbesii

Library:

Name: Rhy1 WS-2016

Instrument: Illumina HiSeq 4000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: RT-PCR

Layout: PAIRED

Runs: 1 run, 32.4M spots, 9.7G bases, 4.3Gb

Run	# of Spots	# of Bases	Size	Published
SRR9888046	32,412,428	9.7G	4.3Gb	2019-08-02

ID:: 8756035

SRA

Sequence Read Archive

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