Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX360764: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-230567' containing sample 'ORNL_W42_B06'
7 ILLUMINA (Illumina HiSeq 2000) runs: 20.2M spots, 4.1G bases, 2.5Gb downloads

UUID: 4a5e39df-85a7-44f3-b41b-ec7021407294

Design: Illumina sequencing of Phascolarctobacterium sp. ORNL_6EZ5-Gt_3_Pl1-21 via random selection

Submitted by: Broad Institute (BI)

Study: HMP reference genome

PRJNA197078 • SRP030597 • All experiments • All runs

Sample: Generic sample from Phascolarctobacterium sp. ORNL_6EZ5-Gt_3_Pl1-21

SAMN00699756 • SRS255862 • All experiments • All runs

Organism: Phascolarctobacterium sp. ORNL_6EZ5-Gt_3_Pl1-21

Library:

Name: Pond-230567

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithoutReference

data_type: WGS

gssr_id: 302689.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:41WMC

material_type: DNA:DNA Somatic

product_order: PDO-526

product_part_number: P-WG-0004

project: G32684

research_project: RP-129

root_sample_id: SM-3QFJ8

sample_id: SM-41WMC

work_request: 35919

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-05-08 19:07:00.0	GAPipeline	RTA1.15.19.5	Sequencer Application 1.6.8.6

Runs: 7 runs, 20.2M spots, 4.1G bases, 2.5Gb

Run	# of Spots	# of Bases	Size	Published
SRR1004113	2,869,505	579.6M	357.3Mb	2013-09-27
SRR1004114	2,872,075	580.2M	358.9Mb	2013-09-27
SRR1004115	2,873,472	580.4M	358.5Mb	2013-09-27
SRR1004116	2,898,689	585.5M	361.6Mb	2013-09-27
SRR1004117	2,905,942	587M	362.7Mb	2013-09-27
SRR1004118	2,884,656	582.7M	359.9Mb	2013-09-27
SRR1004119	2,857,871	577.3M	355.7Mb	2013-09-27

ID:: 509969

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