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SRX4584572: Gastric and duodenal microbiota
1 ION_TORRENT (Ion S5 XL) run: 153,224 spots, 36.8M bases, 27.3Mb downloads

Design: 16S rRNA gene sequencing
Submitted by: Konkuk University School of Medicine
Study: Gastric and duodenal microbiota
show Abstracthide Abstract
The aim of this study was to determine the specific microbial composition of the inflamed mucosa in the stomach and duodenum. We hypothesized that if there is a pathogen like Helicobacter pylori, it will induce mucosal inflammation by infiltrating neutrophils and mononuclear cells. Furthermore, if there is a species that plays a protective role against inflammation, it might underrepresent in inflamed mucosa. The ultimate goal of this study was to define the species related to mucosal inflammation at an earlier stage before the long-term, carcinogenesis process.
Sample: Details are summarized in the attached file named Body 1-98
SAMN09869978 • SRS3697814 • All experiments • All runs
Library:
Name: SB12-1
Instrument: Ion S5 XL
Strategy: AMPLICON
Source: METAGENOMIC
Selection: PCR
Layout: SINGLE
Runs: 1 run, 153,224 spots, 36.8M bases, 27.3Mb
Run# of Spots# of BasesSizePublished
SRR7728226153,22436.8M27.3Mb2018-08-21

ID:
6198064

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